CDS

Accession Number TCMCG006C110095
gbkey CDS
Protein Id XP_013655730.1
Location complement(join(8308746..8309011,8309060..8310869))
Gene LOC106360649
GeneID 106360649
Organism Brassica napus

Protein

Length 691aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013800276.2
Definition pentatricopeptide repeat-containing protein At4g16390, chloroplastic isoform X2 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category S
Description repeat-containing protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009657        [VIEW IN EMBL-EBI]
GO:0009658        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031425        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034250        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045727        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCATTTCATCTGTGCTCCTCTCCTTCATCACTCCTCCACGATCCTAATCTCTTCTCAGTTCACCCGAAACCCACTCCAAGAACTTTCGTTTCCTCTTACAACCCCAACTCTCCTCCCTTCCACTCCAGAAACCTTCTCCAAATAATCCACGTGTCAATACAAGAAGCGGTTCCGCAAGAAACCCACATCGAAAAACCCAAACTTGACGCGGCCTCCAAAAGAAACGCCTGGGTGAACCCCAAGAGCCCTAGAGCTTCTCAGCTCCGTAGAAACTCCTACGACTCGAGGTACTCTTCTCTCGTCAAACTAGCCGAGTCTCTAGACGCGTGTGCCCCAAACGAGGCTGATGTCTCTCATGTAATAACTAAGTTCGGTAGTAACCTCTTTGAGCAAGACGCCGTTGTTACCCTCAACAACATGACAAACCCAGAAACCGCGCCTCTTGTGTTGATTAATCTTCTCGAGACGGTTAAACCGAGCAGGGAAGTGATTCTCTACAATGTCACAATGAAGGTGTTGAGGAAGTCCAAGGATCTCGACAAGGCCGAGAAGCTGTTCGACGAAATGCTCCAGAGAGGAGTTAAACCGGACAACGCAACGTTCACCACTTTAATCAGCTGCGCTAGGCAGTGTGGTTTACCTAAGAGAGCTGTTGCGTGGTTTGAGAAAATGCCTTCCTTTGGCTGTGAGCCTGATAACGTCACTTTGGCTGCTATGATCGATGCTTATGGGCGTGCTGGTAACGTCGAGATGGCGTTGAGCTTGTATGACCGTGCAAGGACTGAGAAATGGCGTATTGACGCTGTTACCTTTTCGACTTTGATTAGGATATATGGTTATAATGGAAACTATGATGGGTGTCTCAACATCTACGAAGAGATGAAGTCTCTTGGTGTGAAGCCAAATCTGGTTATATACAATAGGTTGTTGGATTCTATGGGTAAAGCCAAGAGGCCCTGGCAGGCGAAGATTATCCACAAGGATCTTATTAGCAATGGGTTTGAACCGAACTGGAGTACTTATGCTGCTCTTGTTAGAGCCTATGGTAGAGCTCGTTATGGGGATGATGCGCTTGTTATCTACAGAGAGATGAAGGAGAAAGGATTGGAGTTGACTGTGATTCTCTACAATACTCTCTTGTCCATGTGTGCTGATATCGGATACGTGGATGAGGCCTTTGAGATTTTTCAGGATATGAAGAGTTGTGGGACTTGTGAGCCGGACAGCTGGACTTTCTCTTCGCTCATCACTGTGTACTCTTGCTGTGGGAGGGTGGCTGAGGCTGAGGCGGCTCTGCTTGAGATGAGAGAAGCTGGTTTTGAGCCTACTCTGTTTGTGCTCACGTCGGTGATCCAATGTTATGGGAAAGCCAAGCAGGTTGATGATGTTGTGAGGACGTTTGATCAAGTGTTGGAACTTGGTATAGAGCCAGACGACAGATTCTGTGGTTGCCTTCTGAATGTAATGACTCAGACACCGAGGGAGGAAATTGGTAAACTCATTGAATGTGTGGAGAAGGCTAAGCCAAAGCTTGGTCACGTAGTAAAGATGCTGGTTCAGGATGAAAGCTGCGAGGAAGGGGTGTTAAAGAAGGAAGCATCCGAGTTGATTGATTCCGTCGGCTCTGATGTGAAGAAAGCATATTTGAATTGCTTGATTGATCTCTGTGTCAATCTCAATAAGTTGGAGAAAGCTTGTGAGATTCTACAACTGGGGATGGAGTGTGACATTTATTCAAGTCTCCAATCGAAATCTGCTACCCAATGGTCTTTGCATCTGAAAAGTCTCTCTCTCGGGGCAGCTCTAACCGCTCTTCATGTTTGGATGAACGACTTAACTGAAGCAGCTCTGGCATCCGGAGAAGAGTTCCCTCCGTTGCTTGGAATCAACACTGGACATGGGAAACACAAATACTCAGACAAAGGTCTAGCAGCTGTTGTTGAGTCTCACTTAAAGGAGCTTAATGCTCCCTTCCATGAAGCTCCAGATAAGGTTGGTTGGTTCCTGACTACAAGTGTTGCGGCAAAGGAATGGTTGGAGTCTAGACGTTCATCAGGAGAAGTTTCTGCATAG
Protein:  
MSFHLCSSPSSLLHDPNLFSVHPKPTPRTFVSSYNPNSPPFHSRNLLQIIHVSIQEAVPQETHIEKPKLDAASKRNAWVNPKSPRASQLRRNSYDSRYSSLVKLAESLDACAPNEADVSHVITKFGSNLFEQDAVVTLNNMTNPETAPLVLINLLETVKPSREVILYNVTMKVLRKSKDLDKAEKLFDEMLQRGVKPDNATFTTLISCARQCGLPKRAVAWFEKMPSFGCEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRIDAVTFSTLIRIYGYNGNYDGCLNIYEEMKSLGVKPNLVIYNRLLDSMGKAKRPWQAKIIHKDLISNGFEPNWSTYAALVRAYGRARYGDDALVIYREMKEKGLELTVILYNTLLSMCADIGYVDEAFEIFQDMKSCGTCEPDSWTFSSLITVYSCCGRVAEAEAALLEMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGIEPDDRFCGCLLNVMTQTPREEIGKLIECVEKAKPKLGHVVKMLVQDESCEEGVLKKEASELIDSVGSDVKKAYLNCLIDLCVNLNKLEKACEILQLGMECDIYSSLQSKSATQWSLHLKSLSLGAALTALHVWMNDLTEAALASGEEFPPLLGINTGHGKHKYSDKGLAAVVESHLKELNAPFHEAPDKVGWFLTTSVAAKEWLESRRSSGEVSA